miRBase entry: hsa-mir-6880

Stem-loop hsa-mir-6880


Accession
MI0022727
Symbol
HGNC: MIR6880
Description
Homo sapiens hsa-mir-6880 precursor miRNA


Sequence

28 reads, 5 reads per million, 20 experiments
gagggUGGUGGAGGAAGAGGGCAGCUCccaugacugccugaCCGCCUUCUCUCCUCCCCCAG
..(((.((.((((((((.(((((((......).))))))......)))).)))).)))))..

Structure
ga   U  U    -    -----A      - UC 
  ggg GG GGAG GAAG      GGGCAG C  c
  ||| || |||| ||||      |||||| |   
  CCC CC CCUC CUUC      uccguc g  c
GA   -  U    U    CGCCag      a ua 


Annotation confidence Not enough data
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Genome context
chr12: 124337181-124337242 [-]

Database links

Mature hsa-miR-6880-5p

Accession MIMAT0027660
Description Homo sapiens hsa-miR-6880-5p mature miRNA
Sequence 6 - UGGUGGAGGAAGAGGGCAGCUC - 27
Evidence experimental
meta-analysis [1]

Mature hsa-miR-6880-3p

Accession MIMAT0027661
Description Homo sapiens hsa-miR-6880-3p mature miRNA
Sequence 42 - CCGCCUUCUCUCCUCCCCCAG - 62
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645