miRBase entry: mmu-mir-6943

Stem-loop mmu-mir-6943


Accession
MI0022790
Symbol
MGI: Mir6943
Description
Mus musculus mmu-mir-6943 precursor miRNA


Sequence

460 reads, 12 reads per million, 51 experiments
ggagaUGGGGUGAGGUUGGAAGCUAggccuaucagugaacccacCUGCUUCCAUACCCCUACCCAG
((.(..((((((....(((((((.(((................))))))))))))))))..)))..

Structure
--  a aU      AGGU       U   ccuauca 
  gg g  GGGGUG    UGGAAGC Agg       g
  || |  ||||||    ||||||| |||        
  CC C  CCCCAU    ACCUUCG UCc       u
GA  - AU      ----       -   acccaag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr13: 55453106-55453171 [+]

Database links

Mature mmu-miR-6943-5p

Accession MIMAT0027786
Description Mus musculus mmu-miR-6943-5p mature miRNA
Sequence 6 - UGGGGUGAGGUUGGAAGCUA - 25
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6943-3p

Accession MIMAT0027787
Description Mus musculus mmu-miR-6943-3p mature miRNA
Sequence 45 - CUGCUUCCAUACCCCUACCCAG - 66
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645