miRBase entry: mmu-mir-6958

Stem-loop mmu-mir-6958


Accession
MI0022805
Symbol
MGI: Mir6958
Description
Mus musculus mmu-mir-6958 precursor miRNA

Literature search
1 open access papers mention mmu-mir-6958
(1 sentences)

Sequence

118 reads, 7 reads per million, 40 experiments
GUGGGAGAAGAGGCUGCUGUGGgugcccccaaguccgcuagcucagcuccUCAGCUGCCUCUUGCCAUCACAG
(((((..(((((((.((((.(((.((.....(((......)))..)).))))))).)))))))..).))))..

Structure
--    - AG       U    U   u  cccca   cc 
  GUGG G  AAGAGGC GCUG GGg gc     agu  g
  |||| |  ||||||| |||| ||| ||     |||   
  CACU C  UUCUCCG CGAC Ucc cg     ucg  c
GA    A CG       U    -   u  ---ac   au 


Annotation confidence High
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Genome context
chr15: 89185465-89185537 [-]

Database links

Mature mmu-miR-6958-5p

Accession MIMAT0027816
Description Mus musculus mmu-miR-6958-5p mature miRNA
Sequence 1 - GUGGGAGAAGAGGCUGCUGUGG - 22
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6958-3p

Accession MIMAT0027817
Description Mus musculus mmu-miR-6958-3p mature miRNA
Sequence 51 - UCAGCUGCCUCUUGCCAUCACAG - 73
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645