miRBase entry: mmu-mir-6960

Stem-loop mmu-mir-6960


Accession
MI0022807
Symbol
MGI: Mir6960
Description
Mus musculus mmu-mir-6960 precursor miRNA


Sequence

2606 reads, 31 reads per million, 65 experiments
cugggCAGGAUGAGAAGAGUUUGGCUGgaagcccugcucAGCCAACCACCUCUCUCCUCAG
(((...((((.((((.(.(.(((((((..(((...)))))))))).).).)))))))))))

Structure
   ggC    U    A A U       ga   c 
cug   AGGA GAGA G G UUGGCUG  agc  
|||   |||| |||| | | |||||||  ||| c
GAC   UCCU CUCU C C AACCGAc  ucg  
   ---    -    C A C       --   u 


Annotation confidence Not enough data
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Genome context
chr15: 99080805-99080865 [+]

Database links

Mature mmu-miR-6960-5p

Accession MIMAT0027820
Description Mus musculus mmu-miR-6960-5p mature miRNA
Sequence 6 - CAGGAUGAGAAGAGUUUGGCUG - 27
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6960-3p

Accession MIMAT0027821
Description Mus musculus mmu-miR-6960-3p mature miRNA
Sequence 40 - AGCCAACCACCUCUCUCCUCAG - 61
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645