miRBase entry: mmu-mir-6965

Stem-loop mmu-mir-6965


Accession
MI0022812
Symbol
MGI: Mir6965
Description
Mus musculus mmu-mir-6965 precursor miRNA


Sequence

28 reads, 4 reads per million, 19 experiments
gcgggAGAGGGAGGCUAUUGGGCAGGAGAugaggaagaaccuUCUGUGCUCGGUCUCGCUCCAG
......(((.((((((...(.(((((((............))))))).)..)))))).)))...

Structure
gcgggA   G      AUU G       Augag 
      GAG GAGGCU   G GCAGGAG     g
      ||| ||||||   | |||||||      
      CUC CUCUGG   C UGUCUuc     a
---GAC   G      -CU G       caaga 


Annotation confidence Not enough data
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Genome context
chr17: 24240884-24240947 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-6965
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-6965-5p

Accession MIMAT0027830
Description Mus musculus mmu-miR-6965-5p mature miRNA
Sequence 6 - AGAGGGAGGCUAUUGGGCAGGAGA - 29
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6965-3p

Accession MIMAT0027831
Description Mus musculus mmu-miR-6965-3p mature miRNA
Sequence 43 - UCUGUGCUCGGUCUCGCUCCAG - 64
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645