miRBase entry: mmu-mir-6975

Stem-loop mmu-mir-6975


Accession
MI0022823
Symbol
MGI: Mir6975
Description
Mus musculus mmu-mir-6975 precursor miRNA


Sequence

71 reads, 8 reads per million, 31 experiments
agucgGCUGGGGAGAAAGGGGUUUGGCAcggugcaaaaaugUCUCUCCUUUCUCCUCCUAG
........(((((((((((((...((((...........)))).)))))))))))))....

Structure
agucgGCU             UUU    cggu 
        GGGGAGAAAGGGG   GGCA    g
        |||||||||||||   ||||    c
        CUCCUCUUUCCUC   CUgu    a
----GAUC             --U    aaaa 


Annotation confidence Not enough data
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Genome context
chr17: 35244075-35244135 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-6975
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-6975-5p

Accession MIMAT0027852
Description Mus musculus mmu-miR-6975-5p mature miRNA
Sequence 6 - GCUGGGGAGAAAGGGGUUUGGCA - 28
Evidence experimental
meta-analysis [1]

Mature mmu-miR-6975-3p

Accession MIMAT0027853
Description Mus musculus mmu-miR-6975-3p mature miRNA
Sequence 42 - UCUCUCCUUUCUCCUCCUAG - 61
Evidence experimental
meta-analysis [1]

References

  1. PubMed ID: 22955976
    Discovery of hundreds of mirtrons in mouse and human small RNA data
    "Ladewig E, Okamura K, Flynt AS, Westholm JO, Lai EC"
    "Genome Res (2012) 22:1634-1645