Stem-loop sequence mdm-MIR156l

Accession

MI0022982 (change log)

Description

Malus domestica miR156l stem-loop

Gene family

MIPF0000008; MIR156

Literature search

14 open access papers mention mdm-MIR156l
(298 sentences)

Stem-loop

        a     a   aca  g         g gaa      u  au     ag   a    aucac   acuaguagcgagugguggugacagaagagagugagcacacucgggcaauuguauaaagccaua 
5' gagau gagag gag   ga gcagagaga a   ggugaa gg  gaggg  agu guag     ugg                                                               c
   ||||| ||||| |||   || ||||||||| |   |||||| ||  |||||  ||| ||||     |||                                                               c
3' cucua cucuc cuc   uu ugucuuucu u   uuacuu cc  cuccc  ucg cguc     acc                                                               u
        g     -   --c  g         g --a      u  --     -g   -    -cgcc   cgccacccgccycccgccycccgcacgccgacugucuuucucuucacucguguguagugcguu 

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0022982

Mature sequence mdm-miR156l

• Accession: MIMAT0025878
• Sequence: 88 - ugacagaagagagugagcac - 107
• Evidence: experimental; miRNAseq [1]

References

1. PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).