Stem-loop sequence mdm-MIR156ac

Accession

MI0022999 (change log)

Description

Malus domestica miR156ac stem-loop

Gene family

MIPF0000008; MIR156

Literature search

14 open access papers mention mdm-MIR156ac
(298 sentences)

Stem-loop

        -uc       a    a u    a   ---ua   ua   ac     aac    a a   aaa a       guggugauacguuguugacagaagauagagagcacagauggaugacuugcaauggac 
5' caauc   uaaucau uuau g auua auu     ggg  agg  uaggg   uggg g gag   g gcaggga                                                         u
   |||||   ||||||| |||| | |||| |||     |||  |||  |||||   |||| | |||   | |||||||                                                          
3' guuag   auuagua aaua c uaau uaa     ccc  ucc  guccc   accc c cuc   c cgucccu                                                         a
        uuu       a    - u    c   uuaua   --   ac     cac    - -   --c -       ucgaccuauaucgauccacuacugucuucguaucucucguguuuccucacucuacgu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: MDC002441.399: 5371-5626 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0022999

Mature sequence mdm-miR156ac

• Accession: MIMAT0025895
• Sequence: 87 - uugacagaagauagagagcac - 107
• Evidence: experimental; miRNAseq [1]

References

1. PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).