Stem-loop sequence mdm-MIR156ae

Accession

MI0023001 (change log)

Description

Malus domestica miR156ae stem-loop

Gene family

MIPF0000008; MIR156

Literature search

14 open access papers mention mdm-MIR156ae
(298 sentences)

Stem-loop

       -ugkaaaga          -   a          cg   uucu     u     a 
5' gguu         aggugacaga aga agugagcaca  ugg    uuucu gcaug a
   ||||         |||||||||| ||| ||||||||||  |||    ||||| |||||  
3' ccaa         uccacugucu ucu uuacuugugu  auc    gaaga uguac u
       uuccuacca          a   c          --   --uc     c     c 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: MDC013721.403: 6597-6710 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0023001

Mature sequence mdm-miR156ae

• Accession: MIMAT0025897
• Sequence: 16 - ugacagaagaaagugagcac - 35
• Evidence: experimental; miRNAseq [1]

References

1. PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).