Stem-loop mdm-MIR156ae

Accession

MI0023001

Description

Malus domestica mdm-MIR156ae precursor miRNA

Literature search

14 open access papers mention mdm-MIR156ae
(299 sentences)

Sequence

gguuugkaaagaaggUGACAGAAGAAAGUGAGCACacgugguucuuuucuugcaugaauccaugucagaagcucuauguguucauucucuaucugucaccuaccauccuuaacc
((((........(((((((((((((.((((((((((..(((..(((((...(((((....))))).)))))..))))))))))))).))).)))))))))).........))))

Structure

    -ugkaaaga          -   A          cg   uu     cuu     a 
gguu         aggUGACAGA AGA AGUGAGCACa  ugg  cuuuu   gcaug a
||||         |||||||||| ||| ||||||||||  |||  |||||   |||||  
ccaa         uccacugucu ucu uuacuugugu  auc  gaaga   uguac u
    uuccuacca          a   c          --   uc     --c     c 

Annotation confidence Low

Genome context

MDC013721.403: 6597-6710 [-]

Mature mdm-miR156ae

• Accession: MIMAT0025897
• Description: Malus domestica mdm-miR156ae mature miRNA
• Sequence: 16 - UGACAGAAGAAAGUGAGCAC - 35
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47