Stem-loop mdm-MIR166i

Accession

MI0023025

Description

Malus domestica mdm-MIR166i precursor miRNA

Literature search

8 open access papers mention mdm-MIR166i
(36 sentences)

Sequence

11913660 reads, 691081.0 reads per million, 32 experiments

aguugagggAAAUGUUGUCUGGUUCGAGAUcuuucagugaagcuuggauauugucaucaucugaaugauuUCGGACCAGGCUUCAUUCCCCucaacu
(((((((((.((((..(((((((((((((((.((((((((.((.........))..))).))))).)))))))))))))))..)))).)))))))))

Structure

         A    UU               u     -   -a  uug 
aguugaggg AAUG  GUCUGGUUCGAGAUc uucag uga  gc   g
||||||||| ||||  ||||||||||||||| ||||| |||  ||   a
ucaacuCCC UUAC  CGGACCAGGCUuuag aaguc acu  ug   u
         C    UU               u     u   ac  uua 

Annotation confidence High

Genome context

MDC019971.51: 85-181 [+]

Mature mdm-miR166i-5p

• Accession: MIMAT0056616
• Description: Malus domestica mdm-miR166i-5p mature miRNA
• Sequence: 10 - AAAUGUUGUCUGGUUCGAGAU - 30
• Evidence: experimental ; unknown

Mature mdm-miR166i-3p

• Accession: MIMAT0025921
• Description: Malus domestica mdm-miR166i-3p mature miRNA
• Sequence: 71 - UCGGACCAGGCUUCAUUCCCC - 91
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47