Stem-loop sequence mdm-MIR172b

Accession

MI0023057 (change log)

Description

Malus domestica miR172b stem-loop

Gene family

MIPF0000035; MIR172

Literature search

14 open access papers mention mdm-MIR172b
(76 sentences)

Stem-loop

        c  u    g g  g      u         a  -   -   uu    -  cca 
5' aguca uu uugc g ug agcauc ucaagauuc ca auc uua  uggg cu   a
   ||||| || |||| | || |||||| ||||||||| || ||| |||  |||| ||    
3' ucagu aa aacg c ac ucguag aguucuaag gu uag agu  accc ga   u
        a  u    g g  g      u         a  a   u   uu    c  uuu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates: MDC001582.391: 7037-7151 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0023057

Mature sequence mdm-miR172b

• Accession: MIMAT0025953
• Sequence: 80 - agaaucuugaugaugcugca - 99
• Evidence: experimental; miRNAseq [1]

References

1. PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).