Stem-loop sequence mdm-MIR396d

AccessionMI0023096 (change log)
DescriptionMalus domestica miR396d stem-loop
Gene family MIPF0000047; MIR396
Literature search

8 open access papers mention mdm-MIR396d
(37 sentences)

Stem-loop 
         c                   a    aauucum     -   aaauc 
5' gccaug uuuuccacagcuuucuuga cuuc       ugcug ucu     u
   |||||| ||||||||||||||||||| ||||       ||||| |||      
3' cgguac agagggugucgaaagaacu gaag       acgau agg     c
         c                   c    --guacc     u   ccuuu
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
MDC016069.205: 8556-8658 [+]
intergenic
Clustered miRNAs
< 10kb from mdm-MIR396d
mdm-MIR396dMDC016069.205: 8556-8658 [+]
mdm-MIR396bMDC016069.205: 14552-14719 [-]
Database links

Mature sequence mdm-miR396d

Accession MIMAT0025992
Sequence

10 -  

uuccacagcuuucuugaacuu

 - 30

Get sequence
Evidence experimental; miRNAseq [1]

References

1
PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).