Stem-loop sequence mdm-MIR398a

AccessionMI0023102 (change log)
DescriptionMalus domestica miR398a stem-loop
Gene family MIPF0000107; MIR398
Literature search

5 open access papers mention mdm-MIR398a
(33 sentences)

Stem-loop 
     u   -au    rau   ca         u    aa             -  guguugycygcgacaaa 
5' gu cau   agca   ggu  ccccaaagg guga  cugagaacacaaa ug                 c
   || |||   ||||   |||  ||||||||| ||||  ||||||||||||| ||                 a
3' ca gua   ucgu   cca  gggguuucc cacu  gacucuuguguuu ac                 u
     c   cau    --u   -c         c    -g             u  gcauucgucacgaaugu
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates Overlapping transcripts
MDC009194.120: 3529-3665 [+]
intergenic
Database links

Mature sequence mdm-miR398a

Accession MIMAT0025998
Sequence

94 -  

uguguucucaggucaccccuu

 - 114

Get sequence
Evidence experimental; miRNAseq [1]

References

1
PMID:22704043 "Apple miRNAs and tasiRNAs with novel regulatory networks" Xia R, Zhu H, An YQ, Beers EP, Liu Z Genome Biol. 13:R47(2012).