Stem-loop mdm-MIR482c

Accession

MI0023127

Description

Malus domestica mdm-MIR482c precursor miRNA

Literature search

5 open access papers mention mdm-MIR482c
(9 sentences)

Sequence

245208 reads, 13085.0 reads per million, 27 experiments

ggaauaggaaggcuuugaggagguuuauggAGUGGAAGGGUAGGAAAGAAGUaacuuccuuuuurggucucaaauucuggagaucgaauuUCUUUCCUAACCCUCCCAUUCCuucaauuuccuaaagruuaucccuuuucc
((((.(((....((((.((((((((...(((((((.((((((((((((((((.............((((((........))))))..))))))))))).))))).)))))))...))))))))))))......))).))))

Structure

    u   --aagg    g        uau       A     -           aacuuccuuuuur      aaa 
ggaa agg      cuuu aggagguu   ggAGUGG AGGGU AGGAAAGAAGU             ggucuc   u
|||| |||      |||| ||||||||   ||||||| ||||| |||||||||||             ||||||    
ccuu ucc      gaaa uccuuuaa   CCUUACC UCCCA UCCUUUCUuua             cuagag   u
    u   cuauur    -        cuu       C     A           -----------ag      guc 

Annotation confidence High

Genome context

Unknown

Mature mdm-miR482c-5p

• Accession: MIMAT0056697
• Description: Malus domestica mdm-miR482c-5p mature miRNA
• Sequence: 31 - AGUGGAAGGGUAGGAAAGAAGU - 52
• Evidence: experimental ; unknown

Mature mdm-miR482c-3p

• Accession: MIMAT0026023
• Description: Malus domestica mdm-miR482c-3p mature miRNA
• Sequence: 91 - UCUUUCCUAACCCUCCCAUUCC - 112
• Evidence: experimental ; miRNAseq [1]

References

1. PubMed ID: 22704043
   Apple miRNAs and tasiRNAs with novel regulatory networks
   Xia R, Zhu H, An YQ, Beers EP, Liu Z
   Genome Biol (2012) 13:R47