miRBase entry: ccr-let-7a

Stem-loop ccr-let-7a


Accession
MI0023297
Description
Cyprinus carpio ccr-let-7a precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
8 open access papers mention ccr-let-7a
(52 sentences)

Sequence

uguuucgggaUGAGGUAGUAGGUUGUAUAGUUuagaguuacaacaugggagauaacuguacagccuccuagcuuuccccga
....(((((..(((.(((.(((((((((((((.....................))))))))))))).))).)))..)))))

Structure
uguu     aU   G   U             uagaguuac 
    ucggg  GAG UAG AGGUUGUAUAGUU         a
    |||||  ||| ||| |||||||||||||         a
    agccc  uuc auc uccgacaugucaa         c
----     cu   g   c             uagagggua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-let-7a

Accession MIMAT0026189
Description Cyprinus carpio ccr-let-7a mature miRNA
Sequence 11 - UGAGGUAGUAGGUUGUAUAGUU - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925