miRBase entry: ccr-mir-107

Stem-loop ccr-mir-107


Accession
MI0023307
Description
Cyprinus carpio ccr-mir-107 precursor miRNA
Gene family
MIPF0000024; mir-103

Literature search
1 open access papers mention ccr-mir-107
(1 sentences)

Sequence

acucugugugcucugagcuucuuuacaguguugucuuguggcauggagaucaAGCAGCAUUGUACAGGGCUAUCacagcacacugaaca
..((.(((((((.((((((.((.((((((((((.((((............)))))))))))))).)))))..))).))))))).))...

Structure
-ac  u       c   --   u  u          u    uggca 
   uc gugugcu uga  gcu cu uacaguguug cuug     u
   || ||||||| |||  ||| || |||||||||| ||||      
   ag cacacga aCU  CGG GA AUGUUACGAC GAac     g
aca  u       c   AU   -  C          -    uagag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-107

Accession MIMAT0026199
Description Cyprinus carpio ccr-miR-107 mature miRNA
Sequence 53 - AGCAGCAUUGUACAGGGCUAUC - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925