miRBase entry: ccr-mir-130a

Stem-loop ccr-mir-130a


Accession
MI0023317
Description
Cyprinus carpio ccr-mir-130a precursor miRNA
Gene family
MIPF0000034; mir-130

Literature search
1 open access papers mention ccr-mir-130a
(3 sentences)

Sequence

gucuguccagugccccuuuuauauuguacuacugauaacccaguuauuauagCAGUGCAAUGUUAAAAGGGCAUuggccagg
..(((.(((((((((.(((.((((((((((.((((((((...))))))..)).)))))))))).))).))))))))).))).

Structure
gu   u         c   u          a  --      c 
  cug ccagugccc uuu auauuguacu cu  gauaac  
  ||| ||||||||| ||| |||||||||| ||  |||||| c
  gac gguUACGGG AAA UGUAACGUGA ga  uuauug  
-g   c         A   U          C  ua      a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-130a

Accession MIMAT0026210
Description Cyprinus carpio ccr-miR-130a mature miRNA
Sequence 53 - CAGUGCAAUGUUAAAAGGGCAU - 74
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925