miRBase entry: ccr-mir-130b

Stem-loop ccr-mir-130b


Accession
MI0023318
Description
Cyprinus carpio ccr-mir-130b precursor miRNA
Gene family
MIPF0000034; mir-130

Literature search
1 open access papers mention ccr-mir-130b
(3 sentences)

Sequence

guuugucuguugccugacacucuuucccuguugcacuacugugggagcugcagcuagCAGUGCAAUAAUGAAAGGGCAUcaguccacuggaccagac
((((((((((.(.((((..(((((((..(((((((((.((((((...)))))).....)))))))))..)))))))..)))).).)).))).)))))

Structure
     -   -  u c    ca       cc         ----a      g 
guuug ucu gu g cuga  cucuuuc  uguugcacu     cugugg  
||||| ||| || | ||||  |||||||  |||||||||     |||||| a
cagac agg ca c gacU  GGGAAAG  AUAACGUGA     gacguc  
     c   u  c u    AC       UA         Cgauc      g 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-130b

Accession MIMAT0026211
Description Cyprinus carpio ccr-miR-130b mature miRNA
Sequence 58 - CAGUGCAAUAAUGAAAGGGCAU - 79
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925