miRBase entry: ccr-mir-130c

Stem-loop ccr-mir-130c


Accession
MI0023319
Description
Cyprinus carpio ccr-mir-130c precursor miRNA
Gene family
MIPF0000034; mir-130

Literature search
1 open access papers mention ccr-mir-130c
(3 sentences)

Sequence

uacuguuguuguccagggcccuuuuucuguuguacuacugugcagucagaugagCAGUGCAAUAUUAAAAGGGCAUuggcugacaa
.....((((((.((((.((((((((..((((((...(((((.((......)).)))))))))))..)))))))).)))).))))))

Structure
uacug      u    g        uc      acu     g  gu 
     uuguug ccag gcccuuuu  uguugu   acugu ca  c
     |||||| |||| ||||||||  ||||||   ||||| ||   
     aacagu gguU CGGGAAAA  AUAACG   UGACg gu  a
-----      c    A        UU      ---     a  ag 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-130c

Accession MIMAT0026212
Description Cyprinus carpio ccr-miR-130c mature miRNA
Sequence 55 - CAGUGCAAUAUUAAAAGGGCAU - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925