Stem-loop ccr-mir-133a

Accession

MI0023321

Description

Cyprinus carpio ccr-mir-133a precursor miRNA

Gene family

MIPF0000029; mir-133

Literature search

3 open access papers mention ccr-mir-133a
(12 sentences)

Sequence

cacaaugcuuugcuaaAGCUGGUAAAAUGGAACCAAAucaccucuucaauggauUUGGUCCCCUUCAACCAGCUGUagcuaugcuuugaug
..(((.((...((((.(((((((..((.((.((((((((............)))))))).)).))..))))))).))))...)).)))...

Structure

-ca   u  uuu    a       AA  U  A        accuc 
   caa gc   gcua AGCUGGU  AA GG ACCAAAuc     u
   ||| ||   |||| |||||||  || || ||||||||      
   guu cg   cgaU UCGACCA  UU CC UGGUUuag     u
gua   u  uau    G       AC  C  C        guaac 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-133a-5p

• Accession: MIMAT0026214
• Description: Cyprinus carpio ccr-miR-133a-5p mature miRNA
• Sequence: 17 - AGCUGGUAAAAUGGAACCAAA - 37
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-133a-3p

• Accession: MIMAT0026215
• Description: Cyprinus carpio ccr-miR-133a-3p mature miRNA
• Sequence: 55 - UUGGUCCCCUUCAACCAGCUGU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925