miRBase entry: ccr-mir-144

Stem-loop ccr-mir-144


Accession
MI0023330
Description
Cyprinus carpio ccr-mir-144 precursor miRNA
Gene family
MIPF0000093; mir-144

Literature search
1 open access papers mention ccr-mir-144
(1 sentences)

Sequence

cggucuuguccucuagacaggauaucaucguauacuguaaguucauuauugagacaCUACAGUAUAGAUGAUGUACUauccagggggucaauacacc
.(((.(((((((((.((.((.((((((((.(((((((((..((((....))))....))))))))))))))))).)).)).)))))).)))...)))

Structure
c   --c   -      a  c  g        g         --ag    u 
 ggu   uug uccucu ga ag auaucauc uauacugua    uuca u
 |||   ||| |||||| || || |||||||| |||||||||    ||||  
 cca   aac ggggga cu UC UGUAGUAG AUAUGACAU    gagu a
-   cau   u      c  a  A        -         Caca    u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-144

Accession MIMAT0026225
Description Cyprinus carpio ccr-miR-144 mature miRNA
Sequence 57 - CUACAGUAUAGAUGAUGUACU - 77
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925