Stem-loop ccr-mir-17

Accession

MI0023342

Description

Cyprinus carpio ccr-mir-17 precursor miRNA

Gene family

MIPF0000001; mir-17

Sequence

ucaauguauuguCAAAGUGCUUACAGUGCAGGUAGuauuauggaauaucuACUGCAGUGGAGGCACUUCUAGCaauaua
....((((((((..(((((((..((.(((((.(((((((....)))).)))))))).))..)))))))...))))))))

Structure

ucaa        -CA       UA  G     G   -    a 
    uguauugu   AAGUGCU  CA UGCAG UAG uauu u
    ||||||||   |||||||  || ||||| ||| ||||  
    auauaaCG   UUCACGG  GU ACGUC Auc auaa g
----        AUC       AG  G     -   u    g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-17-5p

• Accession: MIMAT0026236
• Description: Cyprinus carpio ccr-miR-17-5p mature miRNA
• Sequence: 13 - CAAAGUGCUUACAGUGCAGGUAG - 35
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-17-3p

• Accession: MIMAT0026237
• Description: Cyprinus carpio ccr-miR-17-3p mature miRNA
• Sequence: 51 - ACUGCAGUGGAGGCACUUCUAGC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925