Stem-loop ccr-mir-182

Accession

MI0023346

Description

Cyprinus carpio ccr-mir-182 precursor miRNA

Gene family

MIPF0000116; mir-182

Sequence

aagguucuccgaggguaUUUGGCAAUGGUAGAACUCACACuggugagguagucagauccgGUGGUUCUAGACUUGCCAACUAcuaccugagaaca
...((((((....((((.(((((((...((((((...(((((((((.....)))...))))))))))))...))))))).))))....)))))).

Structure

aag      cgag    U       UGG      UCA      ---   g 
   guucuc    ggua UUGGCAA   UAGAAC   CACugg   uga g
   ||||||    |||| |||||||   ||||||   ||||||   ||| u
   caagag    ucAU AACCGUU   AUCUUG   GUGgcc   acu a
--a      ucca    C       CAG      ---      uag   g 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-182-5p

• Accession: MIMAT0026241
• Description: Cyprinus carpio ccr-miR-182-5p mature miRNA
• Sequence: 18 - UUUGGCAAUGGUAGAACUCACAC - 40
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-182-3p

• Accession: MIMAT0026242
• Description: Cyprinus carpio ccr-miR-182-3p mature miRNA
• Sequence: 61 - GUGGUUCUAGACUUGCCAACUA - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925