miRBase entry: ccr-mir-193a

Stem-loop ccr-mir-193a


Accession
MI0023355
Description
Cyprinus carpio ccr-mir-193a precursor miRNA
Gene family
MIPF0000082; mir-193

Literature search
1 open access papers mention ccr-mir-193a
(1 sentences)

Sequence

aaagacauuaauguguuagagguugggucuuugcgggcaaggugaguaguuaaauuuacucucAACUGGCCUACAAAGUCCCAGUuucuggcucauguaaucauccuc
..........(((.(((((((((((((.(((((.((((.((.((((.(((.......))))))).)).)))).))))).))))))))))))).)))............

Structure
--aaagacauua   u             u     c    a  g    u   ua 
            aug guuagagguuggg cuuug gggc ag ugag agu  a
            ||| ||||||||||||| ||||| |||| || |||| |||  a
            uac cggucuuUGACCC GAAAC UCCG UC Acuc uca  u
cuccuacuaaug   u             U     A    G  A    -   uu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-193a

Accession MIMAT0026251
Description Cyprinus carpio ccr-miR-193a mature miRNA
Sequence 64 - AACUGGCCUACAAAGUCCCAGU - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925