Stem-loop ccr-mir-196b

Accession

MI0023358

Description

Cyprinus carpio ccr-mir-196b precursor miRNA

Literature search

2 open access papers mention ccr-mir-196b
(6 sentences)

Sequence

caagcuggucugugauuUAGGUAGUUUCAAGUUGUUGGGcuggacguuuaauuucacaggaaccugaaacugccugaauugcuccaguu
..((((((...((((((((((((((((((.(((.(((...((((........))))))).))).)))))))))))))))))).))))))

Structure

ca      ucu                  A   G   GGc    cgu 
  agcugg   gugauuUAGGUAGUUUCA GUU UUG   ugga   u
  ||||||   |||||||||||||||||| ||| |||   ||||    
  uugacc   cguuaaguccgucaaagu caa gac   acuu   u
--      --u                  c   g   ---    uaa 

Annotation confidence Low

Genome context

Unknown

Mature ccr-miR-196b

• Accession: MIMAT0026254
• Description: Cyprinus carpio ccr-miR-196b mature miRNA
• Sequence: 18 - UAGGUAGUUUCAAGUUGUUGGG - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925