Stem-loop ccr-mir-199

Accession

MI0023359

Description

Cyprinus carpio ccr-mir-199 precursor miRNA

Gene family

MIPF0000040; mir-199

Literature search

2 open access papers mention ccr-mir-199
(4 sentences)

Sequence

cgucauCCCAGUGUUCAGACUACCUGUUCaggaucauacugguguACAGUAGUCUGCACAUUGGUUagac
.(((...(((((((.((((((((.(((((((.......))))...))))))))))).)))))))...)))

Structure

c   auC       U        C   ---    ga 
 guc   CCAGUGU CAGACUAC UGU   UCag  u
 |||   ||||||| |||||||| |||   ||||  c
 cag   GGUUACA GUCUGAUG ACA   gguc  a
-   aUU       C        -   ugu    au 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-199-5p

• Accession: MIMAT0026255
• Description: Cyprinus carpio ccr-miR-199-5p mature miRNA
• Sequence: 7 - CCCAGUGUUCAGACUACCUGUUC - 29
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-199-3p

• Accession: MIMAT0026256
• Description: Cyprinus carpio ccr-miR-199-3p mature miRNA
• Sequence: 46 - ACAGUAGUCUGCACAUUGGUU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925