Stem-loop ccr-mir-203b

Accession

MI0023364

Description

Cyprinus carpio ccr-mir-203b precursor miRNA

Gene family

MIPF0000108; mir-203

Literature search

1 open access papers mention ccr-mir-203b
(2 sentences)

Sequence

ggcuuccucuuuggccgAGUGGUUCUUAACAGUUCAACAGuucuuuugaaaauuGUGAAAUGUUCAGGACCACUUGaucagacgauggaa
....((((((((((.(((((((((((.((((.((((.(((((........))))))))).)))).))))))))))).))))).)).))).

Structure

ggcu   -  -     c           U    G    A     cuu 
    ucc uc uuugg cgAGUGGUUCU AACA UUCA CAGuu   u
    ||| || ||||| ||||||||||| |||| |||| |||||    
    agg ag agacu GUUCACCAGGA UUGU AAGU Guuaa   u
---a   u  c     a           C    A    -     aag 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-203b-5p

• Accession: MIMAT0026261
• Description: Cyprinus carpio ccr-miR-203b-5p mature miRNA
• Sequence: 18 - AGUGGUUCUUAACAGUUCAACAG - 40
• Evidence: experimental ; Illumina [1]

Mature ccr-miR-203b-3p

• Accession: MIMAT0026262
• Description: Cyprinus carpio ccr-miR-203b-3p mature miRNA
• Sequence: 55 - GUGAAAUGUUCAGGACCACUUG - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925