miRBase entry: ccr-mir-21

Stem-loop ccr-mir-21


Accession
MI0023368
Description
Cyprinus carpio ccr-mir-21 precursor miRNA
Gene family
MIPF0000060; mir-21

Literature search
4 open access papers mention ccr-mir-21
(20 sentences)

Sequence

ucccauucugucaggUAGCUUAUCAGACUGGUGUUGGCuguaagucauauggcaacaucagucuaauaggcugccugaaauuuugggcuu
.((((.....(((((((((((((.((((((((((((.(((((.....))))))))))))))))).))))))))))))).....))))...

Structure
--u    uucug             C            G     a 
   ccca     ucaggUAGCUUAU AGACUGGUGUUG Cugua g
   ||||     ||||||||||||| |||||||||||| ||||| u
   gggu     aguccgucggaua ucugacuacaac gguau c
uuc    uuuaa             a            -     a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-21

Accession MIMAT0026267
Description Cyprinus carpio ccr-miR-21 mature miRNA
Sequence 16 - UAGCUUAUCAGACUGGUGUUGGC - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925