miRBase entry: ccr-mir-210

Stem-loop ccr-mir-210


Accession
MI0023369
Description
Cyprinus carpio ccr-mir-210 precursor miRNA
Gene family
MIPF0000086; mir-210

Literature search
1 open access papers mention ccr-mir-210
(1 sentences)

Sequence

gugauuucugaaagcagguaagccacugacuaacgcacauugcgccuguucuucacuccaCUGUGCGUGUGACAGCGGCUaaccagcuuuuggau
......(((((((((.(((.((((.(((.(..(((((((.((.(..((.....))..))).)))))))..).))).)))).))).))))))))).

Structure
gugauu         a   a    a   a ua       u  c cc  u 
      ucugaaagc ggu agcc cug c  acgcaca ug g  ug u
      ||||||||| ||| |||| ||| |  ||||||| || |  || c
      agguuuucg cca UCGG GAC G  UGCGUGU ac c  ac u
-----u         a   a    C   A UG       C  - uc  u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-210

Accession MIMAT0026268
Description Cyprinus carpio ccr-miR-210 mature miRNA
Sequence 61 - CUGUGCGUGUGACAGCGGCU - 80
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925