miRBase entry: ccr-mir-217

Stem-loop ccr-mir-217


Accession
MI0023371
Description
Cyprinus carpio ccr-mir-217 precursor miRNA
Gene family
MIPF0000077; mir-217

Literature search
1 open access papers mention ccr-mir-217
(1 sentences)

Sequence

guuugaucuugcugauguuggugaUACUGCAUCAGGAACUGAUUGGAugauaucuaggagccaucaguucuugaugcacucccuucagcaucgaaaga
......((((..(((((((((......((((((((((((((((.((..............))))))))))))))))))......))))))))).))))

Structure
guuuga    gc         ugaUAC                U  Augaua 
      ucuu  ugauguugg      UGCAUCAGGAACUGAU GG      u
      ||||  |||||||||      |||||||||||||||| ||       
      agaa  gcuacgacu      acguaguucuugacua cc      c
------    -a         ucccuc                -  gaggau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-217

Accession MIMAT0026270
Description Cyprinus carpio ccr-miR-217 mature miRNA
Sequence 25 - UACUGCAUCAGGAACUGAUUGGA - 47
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925