miRBase entry: ccr-mir-22b

Stem-loop ccr-mir-22b


Accession
MI0023377
Description
Cyprinus carpio ccr-mir-22b precursor miRNA
Gene family
MIPF0000053; mir-22

Literature search
1 open access papers mention ccr-mir-22b
(2 sentences)

Sequence

cguugcuucacagucguucuucacuggcuaguuuuauguggcuccaccuuaAAGCUGCCAGUUGAAGAGCUGUuguggguaac
.((((((.(((((..(((((((((((((.(((((((.(((....)))..)))))))))))).))))))))..)))))))))))

Structure
c      u     uc        -     u       -u   g 
 guugcu cacag  guucuuca cuggc aguuuua  gug c
 |||||| |||||  |||||||| ||||| |||||||  |||  
 caaugg guguU  CGAGAAGU GACCG UCGAAau  cac u
-      -     GU        U     -       uc   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-22b

Accession MIMAT0026276
Description Cyprinus carpio ccr-miR-22b mature miRNA
Sequence 52 - AAGCUGCCAGUUGAAGAGCUGU - 73
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925