miRBase entry: ccr-mir-26a

Stem-loop ccr-mir-26a


Accession
MI0023382
Description
Cyprinus carpio ccr-mir-26a precursor miRNA
Gene family
MIPF0000043; mir-26

Literature search
3 open access papers mention ccr-mir-26a
(13 sentences)

Sequence

aguggcuguucccuugUUCAAGUAAUCCAGGAUAGGCUgucuguccugggaggccuauucaugauuacuugcacuagguggcagccguuu
...(((((((.(((.((.(((((((((..(((((((((.(((......))))))))))))..))))))))).)).))).)))))))....

Structure
-agu       c   u  U         CA         g   gu 
    ggcuguu ccu gU CAAGUAAUC  GGAUAGGCU ucu  c
    ||||||| ||| || |||||||||  ||||||||| |||   
    ccgacgg gga ca guucauuag  cuuauccgg agg  c
uuug       u   u  c         ua         -   gu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-26a

Accession MIMAT0026281
Description Cyprinus carpio ccr-miR-26a mature miRNA
Sequence 17 - UUCAAGUAAUCCAGGAUAGGCU - 38
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925