Stem-loop ccr-mir-29b

Accession

MI0023387

Description

Cyprinus carpio ccr-mir-29b precursor miRNA

Gene family

MIPF0000009; mir-29

Literature search

2 open access papers mention ccr-mir-29b
(2 sentences)

Sequence

gcaauccuggacgcuuccuccggaugcugguuucacauggugguuuagauguguucuacgauaguguucuaccaguguucUAGCACCAUUUGAAAUCAGUGUUccugggguaagggaauugc
((((((((..((....(((..((((((((((((((.((((((.(.((((.....)))).((((.((......)).))))..).)))))).))))))))))))))..)))))..))).)))))

Structure

     -   gg  gcuu   cc              c      g uuagauguguucuac    g  uu 
gcaau ccu  ac    ccu  ggaugcugguuuca auggug u               gaua ug  c
||||| |||  ||    |||  |||||||||||||| |||||| |               |||| ||   
cguua ggg  ug    ggg  cUUGUGACUAAAGU UACCAC A               uugu ac  u
     a   aa  ----   uc              U      G -------------Uc    g  ca 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-29b

• Accession: MIMAT0026287
• Description: Cyprinus carpio ccr-miR-29b mature miRNA
• Sequence: 81 - UAGCACCAUUUGAAAUCAGUGUU - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925