miRBase entry: ccr-mir-499

Stem-loop ccr-mir-499


Accession
MI0023407
Description
Cyprinus carpio ccr-mir-499 precursor miRNA
Gene family
MIPF0000173; mir-499

Literature search
2 open access papers mention ccr-mir-499
(3 sentences)

Sequence

gagggaggcagUUAAGACUUGCAGUGAUGUUUAgagaaaugacacaugaacaucacuuuaagucugugcuggcuccug
..(((((.((((..(((((((.(((((((((((.............))))))))))).)))))))..)))).))))).

Structure
ga     g    UA       C           gagaa 
  gggag cagU  AGACUUG AGUGAUGUUUA     a
  ||||| ||||  ||||||| |||||||||||     u
  uccuc gucg  ucugaau ucacuacaagu     g
-g     g    ug       u           acaca 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature ccr-miR-499

Accession MIMAT0026309
Description Cyprinus carpio ccr-miR-499 mature miRNA
Sequence 12 - UUAAGACUUGCAGUGAUGUUUA - 33
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22303472
    Identification and profiling of microRNAs from skeletal muscle of the common carp
    Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
    PLoS One (2012) 7:e30925