Stem-loop ccr-mir-551

Accession

MI0023425

Description

Cyprinus carpio ccr-mir-551 precursor miRNA

Gene family

MIPF0000360; mir-551

Literature search

1 open access papers mention ccr-mir-551
(2 sentences)

Sequence

cuguguugcccuagaaccaaguguggguguggccuggaucuuuguuaugGCGACCCAUCCUUGGUUUCUGaggcuuuacag
(((((..(((.((((((((((.((((((...(((..(((....)))..))).)))))).))))).))))).)))..)))))

Structure

     uu   c     -     u      gug   ug   c 
cugug  gcc uagaa ccaag gugggu   gcc  gau u
|||||  ||| ||||| ||||| ||||||   |||  |||  
gacau  cgg GUCUU GGUUC UACCCA   CGg  uug u
     uu   a     U     C      --G   ua   u 

Annotation confidence Not enough data

Genome context

Unknown

Mature ccr-miR-551

• Accession: MIMAT0026329
• Description: Cyprinus carpio ccr-miR-551 mature miRNA
• Sequence: 50 - GCGACCCAUCCUUGGUUUCUG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22303472
   Identification and profiling of microRNAs from skeletal muscle of the common carp
   Yan X, Ding L, Li Y, Zhang X, Liang Y, Sun X, Teng CB
   PLoS One (2012) 7:e30925