Stem-loop bma-mir-5867

Accession

MI0023469

Description

Brugia malayi bma-mir-5867 precursor miRNA

Sequence

uacauucccaaacagacaucaaaGUGAUUAUUACUCAUGAAUGAAUAcagguuuauucauuauuaaauuuauuccugagcaguaaucauacugauguccgucucaacuggaau
...(((((...((.(((((((..(((((((((.((((.((((((((....................)))))))).)))).)))))))))..))))))).)).......)))))

Structure

uac     ----caa  a       aa         A    U        Acagguuua 
   auucc       ac gacauca  GUGAUUAUU CUCA GAAUGAAU         u
   |||||       || |||||||  ||||||||| |||| ||||||||          
   uaagg       ug cuguagu  uacuaauga gagu cuuauuua         u
---     ucaacuc  c       ca         c    c        aauuauuac 

Annotation confidence Not enough data

Comments

This microRNA was experimentally validated from deep sequencing libraries in the closely related species Brugia pahangi [1].

Genome context

Bmal_v3_scaffold2: 513724-513836 [-]

Mature bma-miR-5867

• Accession: MIMAT0026366
• Description: Brugia malayi bma-miR-5867 mature miRNA
• Sequence: 24 - GUGAUUAUUACUCAUGAAUGAAUA - 47
• Evidence: not_experimental

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4