miRBase entry: ssc-mir-7134

Stem-loop ssc-mir-7134


Accession
MI0023567
Description
Sus scrofa ssc-mir-7134 precursor miRNA

Literature search
2 open access papers mention ssc-mir-7134
(5 sentences)

Sequence

97 reads, 52 reads per million, 11 experiments
AUGUCCGCGGGUUCCCUAUCCcggguugguugaguucgcggAUGCGGAACCUGCGGAUACGG
.((((((((((((((.(((((((((((.....)))))).))))).))))))))))))))...

Structure
--A              C     -      g 
   UGUCCGCGGGUUCC UAUCC cggguu g
   |||||||||||||| ||||| |||||| u
   AUAGGCGUCCAAGG GUAgg gcuuga u
GGC              C     c      g 


Annotation confidence Not enough data
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Genome context
chr5: 5388521-5388582 [+]

Database links

Mature ssc-miR-7134-5p

Accession MIMAT0028143
Description Sus scrofa ssc-miR-7134-5p mature miRNA
Sequence 1 - AUGUCCGCGGGUUCCCUAUCC - 21
Evidence experimental
Illumina [1-2]

Mature ssc-miR-7134-3p

Accession MIMAT0028144
Description Sus scrofa ssc-miR-7134-3p mature miRNA
Sequence 42 - AUGCGGAACCUGCGGAUACGG - 62
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22953717
    Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
    Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
    BMC Genomics (2012) 13:459

  2. PubMed ID: 24499489
    Exploration of microRNAs in porcine milk exosomes
    Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
    BMC Genomics (2014) 15:100