miRBase entry: ssc-mir-7139

Stem-loop ssc-mir-7139


Accession
MI0023572
Description
Sus scrofa ssc-mir-7139 precursor miRNA

Literature search
1 open access papers mention ssc-mir-7139
(2 sentences)

Sequence

1 reads, 1 reads per million, 1 experiments
CCAUUCCUUCGUCUGUGCACUAGaaaaauaacaguaccUAGGGCACAGGAUGGGAUGAGG
.((((((....(((((((.((((..............)))).)))))))..))))))...

Structure
--C      UUCG       A    aaaaau 
   CAUUCC    UCUGUGC CUAG      a
   ||||||    ||||||| ||||       
   GUAGGG    GGACACG GAUc      a
GGA      --UA       G    caugac 


Annotation confidence Not enough data
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Genome context
chr5: 109259471-109259530 [+]

Database links

Mature ssc-miR-7139-5p

Accession MIMAT0028153
Description Sus scrofa ssc-miR-7139-5p mature miRNA
Sequence 1 - CCAUUCCUUCGUCUGUGCACUAG - 23
Evidence experimental
Illumina [1]

Mature ssc-miR-7139-3p

Accession MIMAT0028154
Description Sus scrofa ssc-miR-7139-3p mature miRNA
Sequence 39 - UAGGGCACAGGAUGGGAUGAGG - 60
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22953717
    Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
    Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
    BMC Genomics (2012) 13:459