miRBase entry: ssc-mir-7140

Stem-loop ssc-mir-7140


Accession
MI0023573
Description
Sus scrofa ssc-mir-7140 precursor miRNA

Literature search
1 open access papers mention ssc-mir-7140
(2 sentences)

Sequence

CAACUCAAGGGGGCAUCAUUCAcuucauagucucugugaAUGAUGCCCCUUAGAGUUGAGC
((((((.((((((((((((((((............)))))))))))))))).))))))...

Structure
---      A                uucau 
   CAACUC AGGGGGCAUCAUUCAc     a
   |||||| ||||||||||||||||      
   GUUGAG UUCCCCGUAGUAagug     g
CGA      A                ucucu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr17: 39852404-39852464 [+]

Database links

Mature ssc-miR-7140-5p

Accession MIMAT0028155
Description Sus scrofa ssc-miR-7140-5p mature miRNA
Sequence 1 - CAACUCAAGGGGGCAUCAUUCA - 22
Evidence experimental
Illumina [1]

Mature ssc-miR-7140-3p

Accession MIMAT0028156
Description Sus scrofa ssc-miR-7140-3p mature miRNA
Sequence 40 - AUGAUGCCCCUUAGAGUUGAGC - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22953717
    Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
    Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
    BMC Genomics (2012) 13:459