miRBase entry: ssc-mir-7141

Stem-loop ssc-mir-7141


Accession
MI0023574
Description
Sus scrofa ssc-mir-7141 precursor miRNA


Sequence

GACGGUUUGGACGUUAAGAACaauucauauauuuuauuauaugaauccuUCUUAACGUCCAAACCGUUCC
((((((((((((((((((((..(((((((((......)))))))))..))))))))))))))))))))..

Structure
--                    Ca         uu 
  GACGGUUUGGACGUUAAGAA  auucauaua  u
  ||||||||||||||||||||  |||||||||   
  UUGCCAAACCUGCAAUUCUu  uaaguauau  u
CC                    cc         ua 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr15: 151429201-151429270 [+]

Database links

Mature ssc-miR-7141-5p

Accession MIMAT0028157
Description Sus scrofa ssc-miR-7141-5p mature miRNA
Sequence 1 - GACGGUUUGGACGUUAAGAAC - 21
Evidence experimental
Illumina [1]

Mature ssc-miR-7141-3p

Accession MIMAT0028158
Description Sus scrofa ssc-miR-7141-3p mature miRNA
Sequence 50 - UCUUAACGUCCAAACCGUUCC - 70
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22953717
    Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
    Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
    BMC Genomics (2012) 13:459