Stem-loop ssc-mir-7143

Accession

MI0023576

Description

Sus scrofa ssc-mir-7143 precursor miRNA

Gene family

MIPF0002024; mir-7143

Sequence

AAGCUCAGCUCUGAAGUGCAGAGGcuguuugcacuuccUCUGCACUUGAAGCUGAGACUGA
.(((((((((.(.(((((((((((..((....))..))))))))))).)))))))).))..

Structure

-A  -       C G           cu  u 
  AG CUCAGCU U AAGUGCAGAGG  gu u
  || ||||||| | |||||||||||  ||  
  UC GAGUCGA A UUCACGUCUcc  ca g
AG  A       - G           uu  c 

Annotation confidence Not enough data

Genome context

chr9: 31199350-31199410 [+]

Mature ssc-miR-7143-5p

• Accession: MIMAT0028161
• Description: Sus scrofa ssc-miR-7143-5p mature miRNA
• Sequence: 1 - AAGCUCAGCUCUGAAGUGCAGAGG - 24
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-7143-3p

• Accession: MIMAT0028162
• Description: Sus scrofa ssc-miR-7143-3p mature miRNA
• Sequence: 39 - UCUGCACUUGAAGCUGAGACUGA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22953717
   Profiling microRNAs in lung tissue from pigs infected with Actinobacillus pleuropneumoniae
   Podolska A, Anthon C, Bak M, Tommerup N, Skovgaard K, Heegaard PM, Gorodkin J, Cirera S, Fredholm M
   BMC Genomics (2012) 13:459