Stem-loop dev-mir-D1

Accession

MI0023580

Description

Duck enteritis virus dev-mir-D1 precursor miRNA

Sequence

gcaugcUUGGGAAUGGCGGAAGAGCAGACUuguauaaaaaugUCCUCUUGCGCGAUCCCCACGUuugc
(((.((.((((.((.(((.(((((..(((............)))))))).))).)).)))).)).)))

Structure

   u  U    A  G   G     CA   Uugua 
gca gc UGGG AU GCG AAGAG  GAC     u
||| || |||| || ||| |||||  |||      
cgu UG ACCC UA CGC UUCUC  CUg     a
   u  C    C  G   G     --   uaaaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature dev-miR-D1-5p

• Accession: MIMAT0028169
• Description: Duck enteritis virus dev-miR-D1-5p mature miRNA
• Sequence: 7 - UUGGGAAUGGCGGAAGAGCAGACU - 30
• Evidence: experimental ; Illumina [1]

Mature dev-miR-D1-3p

• Accession: MIMAT0028170
• Description: Duck enteritis virus dev-miR-D1-3p mature miRNA
• Sequence: 43 - UCCUCUUGCGCGAUCCCCACGU - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22492913
   Novel microRNAs encoded by duck enteritis virus
   "Yao Y, Smith LP, Petherbridge L, Watson M, Nair V"
   "J Gen Virol (2012) 93:1530-1536