Stem-loop dre-mir-7147

Accession

MI0023606

Description

Danio rerio dre-mir-7147 precursor miRNA

Literature search

2 open access papers mention dre-mir-7147
(3 sentences)

Sequence

93 reads, 13 reads per million, 6 experiments

gagugcccagugcUGUACCAUGCUGGUAGCCAGUaugaaauagggcuugcugguaaccagcguugugccccacugguugcuc
(((((.((((((..((((.((((((((.(((((((.(........).))))))).)))))))).))))..)))))).)))))

Structure

     c      cU    C        A       u aaa 
gagug ccagug  GUAC AUGCUGGU GCCAGUa g   u
||||| ||||||  |||| |||||||| ||||||| |    
cucgu ggucac  cgug ugcgacca uggucgu c   a
     u      cc    u        a       u ggg 

Annotation confidence Not enough data

Genome context

chr24: 10948064-10948145 [-]

Mature dre-miR-7147

• Accession: MIMAT0028205
• Description: Danio rerio dre-miR-7147 mature miRNA
• Sequence: 14 - UGUACCAUGCUGGUAGCCAGU - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22408181
   Transcriptome-wide analysis of small RNA expression in early zebrafish development
   "Wei C, Salichos L, Wittgrove CM, Rokas A, Patton JG"
   "RNA (2012) 18:915-929