miRBase entry: mdo-mir-29b-2

Stem-loop mdo-mir-29b-2


Accession
MI0023760
Description
Monodelphis domestica mdo-mir-29b-2 precursor miRNA
Gene family
MIPF0000009; mir-29


Sequence

35398 reads, 554 reads per million, 5 experiments
GCUGGUUUCACAUGGUGGCUUAGAuuuuuccaucucuguaucUAGCACCAUUUGAAAUCAGUGU
((((((((((.((((((.((.((((..............)))))))))))).))))))))))..

Structure
--          C      G  U    uuuucc 
  GCUGGUUUCA AUGGUG CU AGAu      a
  |||||||||| |||||| || ||||       
  UGACUAAAGU UACCAC GA Ucua      u
UG          U      -  -    ugucuc 


Annotation confidence High
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Genome context
chr2: 114184522-114184585 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-29b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-29b-3p

Accession MIMAT0004163
Description Monodelphis domestica mdo-miR-29b-3p mature miRNA
Sequence 43 - UAGCACCAUUUGAAAUCAGUGU - 64
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mdo-miR-29b-2-5p

Accession MIMAT0031047
Description Monodelphis domestica mdo-miR-29b-2-5p mature miRNA
Sequence 1 - GCUGGUUUCACAUGGUGGCUUAGA - 24
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45