miRBase entry: mdo-mir-7268

Stem-loop mdo-mir-7268


Accession
MI0023770
Description
Monodelphis domestica mdo-mir-7268 precursor miRNA


Sequence

43417 reads, 736 reads per million, 5 experiments
CAACUGGACCGUGGCCCUGCCUGGcaauuagugccccAGGAUGGCUCUGACCAGCUUCU
...((((..((.((((.(.(((((((.....))))..)))).)))).)).)))).....

Structure
--CAA    AC  U    C G   --    a 
     CUGG  CG GGCC U CCU  GGca u
     ||||  || |||| | |||  |||| u
     GACC  GU UCGG A GGA  ccgu a
UCUUC    -A  C    U -   cc    g 


Annotation confidence Not enough data
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Genome context
chr2: 517205669-517205727 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mdo-mir-7268
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7268-5p

Accession MIMAT0028506
Description Monodelphis domestica mdo-miR-7268-5p mature miRNA
Sequence 1 - CAACUGGACCGUGGCCCUGCCUGG - 24
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mdo-miR-7268-3p

Accession MIMAT0028507
Description Monodelphis domestica mdo-miR-7268-3p mature miRNA
Sequence 38 - AGGAUGGCUCUGACCAGCUUCU - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45