miRBase entry: mdo-mir-7270

Stem-loop mdo-mir-7270


Accession
MI0023772
Description
Monodelphis domestica mdo-mir-7270 precursor miRNA


Sequence

55900 reads, 863 reads per million, 5 experiments
UAAGAUCACAGAGUCUGAAGAGUcugaaaccugacUCCAGGUCUGGUGUGAUCUUGUG
((((((((((.((((((..(((((........))))))))).))..))))))))))..

Structure
--          -G  -    AA     uga 
  UAAGAUCACA  AG UCUG  GAGUc   a
  ||||||||||  || ||||  |||||    
  GUUCUAGUGU  UC GGAC  CUcag   a
GU          GG  U    --     ucc 


Annotation confidence High
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Genome context
chr2: 541551023-541551080 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from mdo-mir-7270
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7270-5p

Accession MIMAT0028510
Description Monodelphis domestica mdo-miR-7270-5p mature miRNA
Sequence 1 - UAAGAUCACAGAGUCUGAAGAGU - 23
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mdo-miR-7270-3p

Accession MIMAT0028511
Description Monodelphis domestica mdo-miR-7270-3p mature miRNA
Sequence 36 - UCCAGGUCUGGUGUGAUCUUGUG - 58
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45