miRBase entry: mdo-mir-199b-2

Stem-loop mdo-mir-199b-2


Accession
MI0023791
Description
Monodelphis domestica mdo-mir-199b-2 precursor miRNA
Gene family
MIPF0000040; mir-199


Sequence

30603 reads, 693 reads per million, 5 experiments
CCAGUGUUCAGACUACCUGUUCaggacaaugcuguuguACAGUAGUCUGCACAUUGGUU
(((((((.((((((((.(((....((((....))))..))))))))))).)))))))..

Structure
--       U        C   UCag    a 
  CCAGUGU CAGACUAC UGU    gaca u
  ||||||| |||||||| |||    ||||  
  GGUUACA GUCUGAUG ACA    uugu g
UU       C        -   --ug    c 


Annotation confidence Not enough data
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Genome context
chr2: 64374175-64374233 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-199b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-199b-3p

Accession MIMAT0026678
Description Monodelphis domestica mdo-miR-199b-3p mature miRNA
Sequence 39 - ACAGUAGUCUGCACAUUGGUU - 59
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mdo-miR-199b-2-5p

Accession MIMAT0031065
Description Monodelphis domestica mdo-miR-199b-2-5p mature miRNA
Sequence 1 - CCAGUGUUCAGACUACCUGUUC - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45