miRBase entry: mdo-mir-7333

Stem-loop mdo-mir-7333


Accession
MI0023863
Description
Monodelphis domestica mdo-mir-7333 precursor miRNA


Sequence

46422 reads, 705 reads per million, 5 experiments
AUUAUAUUCAGUCAACAGACCcuuuuauacaugagUCUGUUGCCUGAAUAUAGUCA
(((((((((((.((((((((.(..........).)))))))).)))))))))))..

Structure
--           U        C uuuu 
  AUUAUAUUCAG CAACAGAC c    a
  ||||||||||| |||||||| |     
  UGAUAUAAGUC GUUGUCUg g    u
AC           C        a uaca 


Annotation confidence High
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Genome context
chr6: 214453342-214453397 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mdo-mir-7333
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mdo-miR-7333-5p

Accession MIMAT0028674
Description Monodelphis domestica mdo-miR-7333-5p mature miRNA
Sequence 1 - AUUAUAUUCAGUCAACAGACC - 21
Evidence experimental
Illumina [1]

Mature mdo-miR-7333-3p

Accession MIMAT0028675
Description Monodelphis domestica mdo-miR-7333-3p mature miRNA
Sequence 36 - UCUGUUGCCUGAAUAUAGUCA - 56
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 23034410
    Birth and expression evolution of mammalian microRNA genes
    "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
    "Genome Res (2013) 23:34-45