Stem-loop mdo-mir-7335

Accession

MI0023865

Description

Monodelphis domestica mdo-mir-7335 precursor miRNA

Sequence

137 reads, 4 reads per million, 5 experiments

AGCUGUGGAUCGGCAUCAGGACagcuagagaggguuuaaguugguucauaucuugggccagcuggUCUGAUGCCAUUUGACAGCUCA
((((((.((..((((((((..(((((......((((((((.((.....)).)))))))))))))..))))))))..)).))))))..

Structure

--      G  UC        GA     agagag        u  g 
  AGCUGU GA  GGCAUCAG  Cagcu      gguuuaag ug u
  |||||| ||  ||||||||  |||||      |||||||| || u
  UCGACA UU  CCGUAGUC  gucga      ccggguuc au c
AC      G  UA        Ug     ------        u  a 

Annotation confidence Not enough data

Genome context

chr7: 86952749-86952835 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from mdo-mir-7335

Mature mdo-miR-7335-5p

• Accession: MIMAT0028678
• Description: Monodelphis domestica mdo-miR-7335-5p mature miRNA
• Sequence: 1 - AGCUGUGGAUCGGCAUCAGGAC - 22
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7335-3p

• Accession: MIMAT0028679
• Description: Monodelphis domestica mdo-miR-7335-3p mature miRNA
• Sequence: 66 - UCUGAUGCCAUUUGACAGCUCA - 87
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45