Stem-loop mdo-mir-7396

Accession

MI0024012

Description

Monodelphis domestica mdo-mir-7396 precursor miRNA

Sequence

526 reads, 13 reads per million, 4 experiments

UAUCUGUAUAUCUUGGUUAUGugucauccuaaucgUGACCUAGAUGUACAGGUUCC
.((((((((((((.(((((((............))))))).))))))))))))...

Structure

--U            U       uguca 
   AUCUGUAUAUCU GGUUAUG     u
   |||||||||||| |||||||      
   UGGACAUGUAGA CCAGUgc     c
CCU            U       uaauc 

Annotation confidence Not enough data

Genome context

chrX: 47667356-47667411 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from mdo-mir-7396

Mature mdo-miR-7396-5p

• Accession: MIMAT0028890
• Description: Monodelphis domestica mdo-miR-7396-5p mature miRNA
• Sequence: 1 - UAUCUGUAUAUCUUGGUUAUG - 21
• Evidence: experimental ; Illumina [1]

Mature mdo-miR-7396-3p

• Accession: MIMAT0028891
• Description: Monodelphis domestica mdo-miR-7396-3p mature miRNA
• Sequence: 36 - UGACCUAGAUGUACAGGUUCC - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23034410
   Birth and expression evolution of mammalian microRNA genes
   "Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H"
   "Genome Res (2013) 23:34-45